FastQE

note

Uses emoji to represent FASTQ sequence quality scores.

https://github.com/fastqe/fastqe

FastQE uses emoji to represent FASTQ sequence quality scores, providing a fun and visually intuitive way to assess sequencing data quality.

The module parses the tab-separated output from FastQE and displays the emoji quality strings for each sample in the report.

Note — MultiQC parses the standard output from FastQE. You must capture FastQE stdout to a file when running, for example:

fastqe input.fastq > fastqe_output.txt

The saved file must have fastqe somewhere in the file name.

File search patterns

fastqe:
  contents: "Filename\tStatistic\tQualities"
  fn: '*fastqe*'
  num_lines: 1