Skip to main content

Ganon

Metagenomics classification: quickly assigns sequence fragments to their closest reference among thousands of references via Interleaved Bloom Filters of k-mer/minimizers

https://pirovc.github.io/ganon/

The module takes summary statistics from a file containing stdout from ganon classify.

File search patterns​

ganon:
  contents:
    - ganon-classify processed
  num_lines: 100