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pangolin

Pangolin (Phylogenetic Assignment of Named Global Outbreak LINeages) was developed to implement the dynamic nomenclature of SARS-CoV-2 lineages, known as the Pango nomenclature.

It allows a user to assign a SARS-CoV-2 genome sequence the most likely lineage (Pango lineage) to SARS-CoV-2 query sequences.

For more information please see the Panogolin documentation