NanoStat

note

Reports various statistics for long read dataset in FASTQ, BAM, or albacore sequencing summary format (supports NanoPack; NanoPlot, NanoComp)

https://github.com/wdecoster/nanostat/, https://github.com/wdecoster/nanoplot/

Programs are part of the NanoPack family for summarising results of sequencing on Oxford Nanopore methods (MinION, PromethION etc.)

File search patterns

nanostat:
  contents_re: Metrics\s+dataset\s*
  max_filesize: 4096
  num_lines: 1
nanostat/legacy:
  contents_re: General summary:\s*
  max_filesize: 4096
  num_lines: 1