Changelog

Bug fixes​

• Fix S3 compactions between different regions

Feature updates and improvements​

• Add scan failure duration setting by @pditommaso in https://github.com/seqeralabs/wave/pull/705
• Change scan config log to info by @pditommaso inf382c51a
• Copy all tags on mirror request by @pditommaso in20a5f7b5

Bug fixes​

• Fix dev scan failure duration and GitHub token by @pditommaso inf5711ff8
• Fix use of container platform in scan job by @pditommaso in61df2424
• Fix prevent rendering image names as URI in mail notification by @pditommaso in f8d57921
• Fix tune mirror config by @pditommaso in f7290bd5

Full changelog: https://github.com/seqeralabs/wave/compare/v1.13.3...v1.13.4

Feature updates and improvements​

• Capture usage metrics for scan and mirrors by @munishchouhan in https://github.com/seqeralabs/wave/pull/699
• Improve build history view by @munishchouhan in https://github.com/seqeralabs/wave/pull/701
• Add GitHub token to scan job env by @pditommaso in https://github.com/seqeralabs/wave/pull/703
• Add list of scan for a given partial scanId by @munishchouhan in https://github.com/seqeralabs/wave/pull/704

Full changelog: https://github.com/seqeralabs/wave/compare/v1.13.2...v1.13.3

Feature updates and improvements​

• Propagate container platform with freeze by @pditommaso in https://github.com/seqeralabs/wave/pull/692
• Add link to inspect from build view by @pditommaso in https://github.com/seqeralabs/wave/pull/695
• Add builds-view to show the list of builds for a given container ID by @munishchouhan in https://github.com/seqeralabs/wave/pull/696

Bug fixes​

• Fix empty array plus icon by @munishchouhan in https://github.com/seqeralabs/wave/pull/697

Full changelog: https://github.com/seqeralabs/wave/compare/v1.13.1...v1.13.2

Bug fixes​

• Fix Conda lock download by @pditommaso in 0e86c4

Full changelog: https://github.com/seqeralabs/wave/compare/v1.13.0...v1.13.1

Feature updates and improvements​

• Data Studios
  • Data Studio sessions can now share mounted data across the same workspace.
  • New dashboard for Data Studios.
• Quick Launch now accepts pipelines that do not have a branch named master.
• Improved query times on some clean up job queries.
• NF Launcher image is now by default pulled from cr.seqera.io public registry instead of quay.
• The new Launch Form is now available in Quick Launch and personal workspaces.
• Improved fetching of the cloud cost estimation for Google Cloud Platform's (GCP) spot instances.
• ECS container timeout configuration is now defaulted to 10 minutes (ECS_CONTAINER_CREATE_TIMEOUT=10m,ECS_CONTAINER_STOP_TIMEOUT=10m,ECS_MANIFEST_PULL_TIMEOUT=10m).

Bug fixes​

• If the revision wasn't specified in Quick Launch, schemas weren't correctly fetched.
• Retrieving managed identity IDs on updates resulted in the incorrect managed identity being displayed.
• Start in new tab from the Data Studio form didn't navigate back the main tab to Data Studios page.

Feature updates and improvements​

• Add inspect view by @munishchouhan in https://github.com/seqeralabs/wave/pull/619
• Remove BiCacheStore data structure by @pditommaso in https://github.com/seqeralabs/wave/pull/653
• Remove Spack by @pditommaso in https://github.com/seqeralabs/wave/pull/601
• Improve handling build id in view page by @pditommaso in https://github.com/seqeralabs/wave/pull/651
• Add container mirror by @pditommaso in https://github.com/seqeralabs/wave/pull/646
• Refactor state store components by @pditommaso in https://github.com/seqeralabs/wave/pull/657
• Improve inspect for multi platform container images by @munishchouhan in https://github.com/seqeralabs/wave/pull/660
• Remove deprecated keyId by @pditommaso in https://github.com/seqeralabs/wave/pull/616
• Add code coverage report to build by @pditommaso in https://github.com/seqeralabs/wave/pull/661
• Add better pool handling for Jackson mapper objects by @pditommaso in https://github.com/seqeralabs/wave/pull/666
• Add TypeSpec for container mirror by @munishchouhan in https://github.com/seqeralabs/wave/pull/669
• Scan v2 by @pditommaso in https://github.com/seqeralabs/wave/pull/662
• Add support for Conda lockfile by @munishchouhan in https://github.com/seqeralabs/wave/pull/642
• Add copy button and scroll bars in views by @munishchouhan in https://github.com/seqeralabs/wave/pull/674
• Added TypeSpec for container mirror and status by @munishchouhan in https://github.com/seqeralabs/wave/pull/677
• Add download icon and updated copy icon by @munishchouhan in https://github.com/seqeralabs/wave/pull/678
• Remove IP address by @pditommaso in https://github.com/seqeralabs/wave/pull/680
• Refactor MirrorConfig by @munishchouhan in https://github.com/seqeralabs/wave/pull/668
• Bump AWS SDK to 2.28.15 by @pditommaso in https://github.com/seqeralabs/wave/pull/667
• Remove monospace from td by @munishchouhan in https://github.com/seqeralabs/wave/pull/683

Bug fixes​

• Fix compile error by @munishchouhan in https://github.com/seqeralabs/wave/pull/659
• Fix repository creds check by @pditommaso in https://github.com/seqeralabs/wave/pull/665
• Fix entity too large by @munishchouhan in https://github.com/seqeralabs/wave/pull/658
• Fix compile error by @munishchouhan in https://github.com/seqeralabs/wave/pull/659
• Fix mirror TypeSpec by @munishchouhan in https://github.com/seqeralabs/wave/pull/670
• Fix deserialization exception on WaveScanRecord by @munishchouhan in https://github.com/seqeralabs/wave/pull/679
• Fix exception when there is no Conda lockfile by @munishchouhan in https://github.com/seqeralabs/wave/pull/685
• Fix container view by @munishchouhan in https://github.com/seqeralabs/wave/pull/686
• Fix inspect-test by @munishchouhan in https://github.com/seqeralabs/wave/pull/652

Breaking​

• This version introduces some changes in build and jobs state metadata stored in Redis. Make sure no jobs are running while deploying this version.

Full Changelog: https://github.com/seqeralabs/wave/compare/v1.12.4...v1.13.0

Bug fixes​

• Mailer dependency issue causing email send failures.

Security updates​

• Fix critical frontend vulnerabilities.

• Add Fusion version pinning info to Fusion config scope
• Add container tip in the task error report
• Add support for Java 23
• Add Platform workflow prefix in AWS Batch job names
• Fix AWS spot attempts with zero value
• Fix Azure Fusion env misses credentials when no key or SAS provided
• Fix CI build taking only the commit msg header
• Fix Inconsistency with camelCase and kebab-case config param
• Fix XPath default de-serializer issue
• Fix failOnIgnore causes task monitor to stop submitting tasks
• Fix large mermaid diagrams
• Improve Wave build timeout handling
• Include additional fields to manifest
• Remove mini from Flux submit command
• Update container handling with charliecloud
• Update Documentation structure
• Update nextflow install docs
• Bump groovy 4.0.23
• Bump nf-wave@1.6.0
• Bump nf-azure@1.10.0
• Bump nf-amazon@2.9.0

https://github.com/nextflow-io/nextflow/releases/tag/v24.09.0-edge

Python 3.13, bugs fixed, improved sample grouping UI, and handling freezes in containers with incompatible architectures.